NOTE: For real-time help either before or during the workshop, you are welcome to try posting in our chat room: http://j.mp/SWCchat
Other materials:
The Analyzing Next-Generation Sequencing Data summer course is a good resource for people interested in NGS specifically.
For people interested in learning Python, I got really strong positive recommendations for the MIT OpenCourseware and Khan Academies lectures from a course attendee.
- iPython Notebook is available at http://it-test7.lj.ad.scripps.edu:8888/ (NOTE: only available from the Scripps network)
- This server is also available for interactive shell use – SSH to username@it-test7.lj.ad.scripps.edu (replacing ‘username’ with your Scripps username)
- To request an account, please send an email to hpc_ca@scripps.edu
- Account will provide access to two nodes for interactive use, and also the potential of using our high-performance computing (HPC) cluster.
- Both are older machines that currently aren’t well supported.
- We suggest you not use these servers to use/practice the skills learned in this workshop
- To encourage IT to make these more up-to-date and publicized resources, use it-test7
- Web sign up: http://lists.scripps.edu/majorcool.cgi
- Or, send email to majordomo@scripps.edu with ‘subscribe cbb’ (no quotes) in the message body
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